Extending the Linear Model with R

Generalized Linear, Mixed Effects and Nonparametric Regression Models

Author: Julian J. Faraway

Publisher: CRC Press

ISBN: 9780203492284

Category: Mathematics

Page: 312

View: 9179

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Linear models are central to the practice of statistics and form the foundation of a vast range of statistical methodologies. Julian J. Faraway's critically acclaimed Linear Models with R examined regression and analysis of variance, demonstrated the different methods available, and showed in which situations each one applies. Following in those fo
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Extending the Linear Model with R

Generalized Linear, Mixed Effects and Nonparametric Regression Models, Second Edition

Author: Julian J. Faraway

Publisher: CRC Press

ISBN: 1498720986

Category: Mathematics

Page: 399

View: 5253

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Start Analyzing a Wide Range of Problems Since the publication of the bestselling, highly recommended first edition, R has considerably expanded both in popularity and in the number of packages available. Extending the Linear Model with R: Generalized Linear, Mixed Effects and Nonparametric Regression Models, Second Edition takes advantage of the greater functionality now available in R and substantially revises and adds several topics. New to the Second Edition Expanded coverage of binary and binomial responses, including proportion responses, quasibinomial and beta regression, and applied considerations regarding these models New sections on Poisson models with dispersion, zero inflated count models, linear discriminant analysis, and sandwich and robust estimation for generalized linear models (GLMs) Revised chapters on random effects and repeated measures that reflect changes in the lme4 package and show how to perform hypothesis testing for the models using other methods New chapter on the Bayesian analysis of mixed effect models that illustrates the use of STAN and presents the approximation method of INLA Revised chapter on generalized linear mixed models to reflect the much richer choice of fitting software now available Updated coverage of splines and confidence bands in the chapter on nonparametric regression New material on random forests for regression and classification Revamped R code throughout, particularly the many plots using the ggplot2 package Revised and expanded exercises with solutions now included Demonstrates the Interplay of Theory and Practice This textbook continues to cover a range of techniques that grow from the linear regression model. It presents three extensions to the linear framework: GLMs, mixed effect models, and nonparametric regression models. The book explains data analysis using real examples and includes all the R commands necessary to reproduce the analyses.
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Linear Models with R

Author: Julian J. Faraway

Publisher: CRC Press

ISBN: 0203507274

Category: Mathematics

Page: 240

View: 8534

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Books on regression and the analysis of variance abound—many are introductory, many are theoretical. While most of them do serve a purpose, the fact remains that data analysis cannot be properly learned without actually doing it, and this means using a statistical software package. There are many of these to choose from, all with their particular strengths and weaknesses. Lately, however, one such package has begun to rise above the others thanks to its free availability, its versatility as a programming language, and its interactivity. That software is R. In the first book that directly uses R to teach data analysis, Linear Models with R focuses on the practice of regression and analysis of variance. It clearly demonstrates the different methods available and, more importantly, in which situations each one applies. It covers all of the standard topics, from the basics of estimation to missing data, factorial designs, and block designs. It also discusses topics, such as model uncertainty, rarely addressed in books of this type. The presentation incorporates numerous examples that clarify both the use of each technique and the conclusions one can draw from the results. All of the data sets used in the book are available for download from http://people.bath.ac.uk/jjf23/LMR/ The author assumes that readers know the essentials of statistical inference and have a basic knowledge of data analysis, linear algebra, and calculus. The treatment reflects his view of statistical theory and his belief that qualitative statistical concepts, while somewhat more difficult to learn, are just as important because they enable us to practice statistics rather than just talk about it.
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Linear Models with R, Second Edition

Author: Julian J. Faraway

Publisher: CRC Press

ISBN: 1439887330

Category: Mathematics

Page: 286

View: 844

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A Hands-On Way to Learning Data Analysis Part of the core of statistics, linear models are used to make predictions and explain the relationship between the response and the predictors. Understanding linear models is crucial to a broader competence in the practice of statistics. Linear Models with R, Second Edition explains how to use linear models in physical science, engineering, social science, and business applications. The book incorporates several improvements that reflect how the world of R has greatly expanded since the publication of the first edition. New to the Second Edition Reorganized material on interpreting linear models, which distinguishes the main applications of prediction and explanation and introduces elementary notions of causality Additional topics, including QR decomposition, splines, additive models, Lasso, multiple imputation, and false discovery rates Extensive use of the ggplot2 graphics package in addition to base graphics Like its widely praised, best-selling predecessor, this edition combines statistics and R to seamlessly give a coherent exposition of the practice of linear modeling. The text offers up-to-date insight on essential data analysis topics, from estimation, inference, and prediction to missing data, factorial models, and block designs. Numerous examples illustrate how to apply the different methods using R.
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Generalized Linear Models

A Bayesian Perspective

Author: Dipak K. Dey,Sujit K. Ghosh,Bani K. Mallick

Publisher: CRC Press

ISBN: 9780824790349

Category: Mathematics

Page: 440

View: 5740

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This volume describes how to conceptualize, perform, and critique traditional generalized linear models (GLMs) from a Bayesian perspective and how to use modern computational methods to summarize inferences using simulation. Introducing dynamic modeling for GLMs and containing over 1000 references and equations, Generalized Linear Models considers parametric and semiparametric approaches to overdispersed GLMs, presents methods of analyzing correlated binary data using latent variables. It also proposes a semiparametric method to model link functions for binary response data, and identifies areas of important future research and new applications of GLMs.
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Data Analysis and Graphics Using R

An Example-Based Approach

Author: John Maindonald,W. John Braun

Publisher: Cambridge University Press

ISBN: 1139486675

Category: Computers

Page: N.A

View: 8001

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Discover what you can do with R! Introducing the R system, covering standard regression methods, then tackling more advanced topics, this book guides users through the practical, powerful tools that the R system provides. The emphasis is on hands-on analysis, graphical display, and interpretation of data. The many worked examples, from real-world research, are accompanied by commentary on what is done and why. The companion website has code and datasets, allowing readers to reproduce all analyses, along with solutions to selected exercises and updates. Assuming basic statistical knowledge and some experience with data analysis (but not R), the book is ideal for research scientists, final-year undergraduate or graduate-level students of applied statistics, and practising statisticians. It is both for learning and for reference. This third edition expands upon topics such as Bayesian inference for regression, errors in variables, generalized linear mixed models, and random forests.
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Generalized Linear Models

A Unified Approach

Author: Jeff Gill

Publisher: Chronicle Books

ISBN: 9780761920557

Category: Political Science

Page: 101

View: 8027

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The author explains the theoretical underpinnings of generalized linear models so that researchers can decide how to select the best way to adapt their data for this type of analysis. Examples are provided to illustrate the application of GLM to actual data and the author includes his Web address where additional resources can be found.
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Applied Econometrics with R

Author: Christian Kleiber,Achim Zeileis

Publisher: Springer Science & Business Media

ISBN: 9780387773186

Category: Business & Economics

Page: 222

View: 1808

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R is a language and environment for data analysis and graphics. It may be considered an implementation of S, an award-winning language initially - veloped at Bell Laboratories since the late 1970s. The R project was initiated by Robert Gentleman and Ross Ihaka at the University of Auckland, New Zealand, in the early 1990s, and has been developed by an international team since mid-1997. Historically, econometricians have favored other computing environments, some of which have fallen by the wayside, and also a variety of packages with canned routines. We believe that R has great potential in econometrics, both for research and for teaching. There are at least three reasons for this: (1) R is mostly platform independent and runs on Microsoft Windows, the Mac family of operating systems, and various ?avors of Unix/Linux, and also on some more exotic platforms. (2) R is free software that can be downloaded and installed at no cost from a family of mirror sites around the globe, the Comprehensive R Archive Network (CRAN); hence students can easily install it on their own machines. (3) R is open-source software, so that the full source code is available and can be inspected to understand what it really does, learn from it, and modify and extend it. We also like to think that platform independence and the open-source philosophy make R an ideal environment for reproducible econometric research.
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An R and S-Plus Companion to Applied Regression

Author: John Fox,Georges Monette

Publisher: SAGE

ISBN: 9780761922803

Category: Mathematics

Page: 312

View: 744

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"This book fits right into a needed niche: rigorous enough to give full explanation of the power of the S language, yet accessible enough to assign to social science graduate students without fear of intimidation. It is a tremendous balance of applied statistical "firepower" and thoughtful explanation. It meets all of the important mechanical needs: each example is given in detail, code and data are freely available, and the nuances of models are given rather than just the bare essentials. It also meets some important theoretical needs: linear models, categorical data analysis, an introduction to applying GLMs, a discussion of model diagnostics, and useful instructions on writing customized functions. " —JEFF GILL, University of Florida, Gainesville
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Graphics for Statistics and Data Analysis with R

Author: Kevin J Keen

Publisher: CRC Press

ISBN: 1584880872

Category: Mathematics

Page: 489

View: 3179

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Graphics for Statistics and Data Analysis with R presents the basic principles of sound graphical design and applies these principles to engaging examples using the graphical functions available in R. It offers a wide array of graphical displays for the presentation of data, including modern tools for data visualization and representation. The book considers graphical displays of a single discrete variable, a single continuous variable, and then two or more of each of these. It includes displays and the R code for producing the displays for the dot chart, bar chart, pictographs, stemplot, boxplot, and variations on the quantile-quantile plot. The author discusses nonparametric and parametric density estimation, diagnostic plots for the simple linear regression model, polynomial regression, and locally weighted polynomial regression for producing a smooth curve through data on a scatterplot. The last chapter illustrates visualizing multivariate data with examples using Trellis graphics. Showing how to use graphics to display or summarize data, this text provides best practice guidelines for producing and choosing among graphical displays. It also covers the most effective graphing functions in R. R code is available for download on the book’s website.
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